http://www.datam0nk3y.org/hyphy/ 2010-02-10T14:28:08-08:00 http://www.datam0nk3y.org/hyphy/ http://www.datam0nk3y.org/hyphy/lib/images/favicon.ico text/html 2010-02-09T14:22:06-08:00 Sergei L Kosakovsky Pond http://www.datam0nk3y.org/hyphy/doku.php?id=cms&rev=1265754126&do=diff We are working on populating this tutorial, but first we must finish the manuscript describing the method. Thanks for your patience! text/html 2010-02-03T17:48:14-08:00 Sergei L Kosakovsky Pond http://www.datam0nk3y.org/hyphy/doku.php?id=datamonkey&rev=1265248094&do=diff * Codon Model Selection: how to interpret the results of GA-based codon model selection implemented in Datamonkey text/html 2010-01-19T10:12:30-08:00 Sergei L Kosakovsky Pond http://www.datam0nk3y.org/hyphy/doku.php?id=download&rev=1263924750&do=diff Available HyPhy versions * Developmental. Presently, HyPhy is undergoing a major rewrite leading up to version 2.0. For the latest features and maximum speed, download on of the current builds. This is recommended for most users. * Latest v1.0 release. The latest 1.0 release was compiled on May 12th, 2008 and has not been updated since then. You may want to download this version if you need the functionality not yet fully ported to v2.0 (this is rare). text/html 2009-10-15T14:59:26-08:00 Joel Wertheim http://www.datam0nk3y.org/hyphy/doku.php?id=veg&rev=1255643966&do=diff UCSD viral evolution group is comprised of members of several departments from the UCSD School of Medicine. The primary areas of our basic research efforts are statistical evolutionary analysis of pathogens and computational biology in translational research. We apply the methods and software tools that we develop to the study of HIV-1, Influenza A virus and other pathogens. text/html 2009-10-08T15:36:28-08:00 Art Poon http://www.datam0nk3y.org/hyphy/doku.php?id=art_fy_poon&rev=1255041388&do=diff Art FY Poon Associate Research Scientist, Bioinformatics BC Centre of Excellence in HIV/AIDS Vancouver, British Columbia 603-1081 Burrard St Canada V6Z 1Y6 E-mail: email Art Research Interests I study the molecular evolution of viruses, in particular by developing computational or experimental techniques to elucidate the biological constraints from the signature of evolutionary processes on genetic sequence data. I also collaborate with other groups in developing computational too… text/html 2009-10-08T15:35:32-08:00 Art Poon http://www.datam0nk3y.org/hyphy/doku.php?id=team&rev=1255041332&do=diff HyPhy contributors outside UCSD Spencer V Muse Professor of Statistics at North Carolina State University Spencer's lab at NCSU Simon DW Frost University Senior Lecturer, Cambridge University Simon's lab at Cambridge Art FY Poon Associate Research Scientist, Bioinformatics BC Centre for Excellence in HIV/AIDS text/html 2009-10-08T11:42:23-08:00 Sergei L Kosakovsky Pond http://www.datam0nk3y.org/hyphy/doku.php?id=gildredmove&rev=1255027343&do=diff * Rolling an empty cluster cabinet down 5 city blocks and getting a lot of really odd looks from the drivers. [Rolling an empty cluster cabinet down 5 city blocks and getting a lot of really odd looks from the drivers.] * Taking a well-deserved break at the destination.